diff --git a/pixstrip-core/src/pipeline.rs b/pixstrip-core/src/pipeline.rs
index 60b9b8b..89e1bbb 100644
--- a/pixstrip-core/src/pipeline.rs
+++ b/pixstrip-core/src/pipeline.rs
@@ -89,6 +89,19 @@ impl ProcessingJob {
             })
             .unwrap_or("bin");
 
-        self.output_dir.join(format!("{}.{}", stem, ext))
+        let filename = format!("{}.{}", stem, ext);
+
+        if self.preserve_directory_structure {
+            // Maintain relative path from input_dir
+            if let Ok(rel) = source.path.strip_prefix(&self.input_dir) {
+                if let Some(parent) = rel.parent() {
+                    if parent.components().count() > 0 {
+                        return self.output_dir.join(parent).join(filename);
+                    }
+                }
+            }
+        }
+
+        self.output_dir.join(filename)
     }
 }
diff --git a/pixstrip-gtk/src/app.rs b/pixstrip-gtk/src/app.rs
index 3591dd7..bc061bf 100644
--- a/pixstrip-gtk/src/app.rs
+++ b/pixstrip-gtk/src/app.rs
@@ -1682,6 +1682,17 @@ fn show_results(
         }
     }
 
+    // Play completion sound (if enabled in settings)
+    if config.play_completion_sound {
+        std::thread::spawn(|| {
+            // Use canberra-gtk-play for system sound (standard on GNOME)
+            let _ = std::process::Command::new("canberra-gtk-play")
+                .arg("--id=complete")
+                .arg("--description=Processing complete")
+                .output();
+        });
+    }
+
     // Auto-open output folder if enabled
     if config.auto_open_output {
         let output = ui.state.output_dir.borrow().clone();